Gevraagd door: David Absalom
VRAAGSTELLER Algemeen

Cbioportal Data

Link van Cbioportal Data pagina wordt hieronder gegeven. Pagina's met betrekking tot Cbioportal Data worden ook vermeld.

Laatst bijgewerkt: 2022-02-05 11:28:28

19

Toegevoegd door: Wendy Read

Uitlegger

cBioPortal for Cancer Genomics

Colorectal Adenocarcinoma Triplets (MSKCC, Genome Biol 2014) 138 samples. Colorectal Cancer (MSK, Gastroenterology 2020) 471 samples. Disparities in metastatic colorectal cancer between Africans and Americans (MSK, 2020) 64 samples. Metastatic Colorectal Cancer (MSKCC, Cancer Cell 2018) 1134 samples.
Url: https://www.cbioportal.org/
cBioPortal for Cancer Genomics

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

UNKNOWN

Populair in

Up

Service status

Toegevoegd door: Lauren Pullock

Uitlegger

Downloads - cBioPortal

There are several ways in which one can download data from cBioPortal including manual and programmatic approaches. See options outlined below. Datasets Page A zip file for each study on cbioportal.org can be download from the Datasets Page. One can also use the R client cBioPortalData to programmatically download all of these files. Datahub
Url: https://docs.cbioportal.org/5.2-datasets/downloads
Downloads - cBioPortal

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

UNKNOWN

Populair in

Up

Service status

Toegevoegd door: Bruce Ward

Uitlegger

cBioPortal: A Web Platform of Gene-Based Data Exploration ...

08-03-2019 · The cBioPortal is a web application platform that facilitates data exploration and analysis through the use of a variety of visualization and analytical tools. Some of the tools in cBioPortal, such as the network mapper Cytoscape. , were developed by external sources, and some were developed by the cBio engineers themselves.
Url: https://ocg.cancer.gov/e-newsletter-issue/issue-10/cbioportal-web-platform-gene-based-data
cBioPortal: A Web Platform of Gene-Based Data Exploration ...

6,529,974

Maandelijkse bezoeken

14,882

Alexa Rank

US

Populair in

Up

Service status

Toegevoegd door: Harry Kefford

Uitlegger

cBioPortal Hands-on Introduction - Health-RI

cBioPortal Hands-on Introduction Version 02/December/2019. What is cBioPortal for Cancer Genomics? The tool cBioPortal is an open-source software, which is hosted by HealthRI as a data integration platform - where processed data from different research studies have been made available for view and query. What is the purpose of this hand-out?
Url: https://www.health-ri.nl/sites/healthri/files/2020-03/cBioPortal%20Manual%2002Dec2019.pdf
cBioPortal Hands-on Introduction - Health-RI

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

NL

Populair in

Up

Service status

Toegevoegd door: R Seaman

Uitlegger

Data Loading Overview - cBioPortal

Preparing Study Data. A study to be loaded in cBioPortal can basically consist of a directory where all the data files are located. Each data file needs a meta file that refers to it and both files need to comply to the format required for the specific data type. The format and fields expected for each file are documented in the File Formats page.
Url: https://docs.cbioportal.org/5.1-data-loading/data-loading
Data Loading Overview - cBioPortal

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

UNKNOWN

Populair in

Up

Service status

Toegevoegd door: Sam Althorpe

Uitlegger

File Formats - cBioPortal

The sample file is required, whereas the patient file is optional. cBioPortal has specific functionality for a core set of patient and sample columns, but can also display custom columns (see section "Custom columns in clinical data"). Meta files
Url: https://docs.cbioportal.org/5.1-data-loading/data-loading/file-formats
File Formats - cBioPortal

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

UNKNOWN

Populair in

Up

Service status

Toegevoegd door: Belinda Quinn

Uitlegger

cBioPortal | The Hyve

cBioPortal Visualizing and analyzing large-scale cancer genomics datasets cBioPortal provides researchers and clinicians an insight in large scale cancer genomics datasets, helping them create and select better treatments for patients. Benefits …
Url: https://www.thehyve.nl/services/cbioportal
cBioPortal | The Hyve

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

NL

Populair in

Up

Service status

Toegevoegd door: Dale Exon

Uitlegger

Frequently Asked Questions - cBioPortal

The cBioPortal is an exploratory analysis tool for exploring large-scale cancer genomic data sets that hosts data from large consortium efforts, like TCGA and TARGET, as well as publications from individual labs.
Url: https://docs.cbioportal.org/1.-general/faq
Frequently Asked Questions - cBioPortal

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

UNKNOWN

Populair in

Up

Service status

Toegevoegd door: Fintan Kelleher

Uitlegger

README - cBioPortal

README. Welcome to the documentation for cBioPortal! Below you can find an index of all available documentation to help you to deploy and maintain a local instance of cBioPortal, as well as information on how to upload data. Specific pages are also available for developers.
Url: https://docs.cbioportal.org/
README - cBioPortal

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

UNKNOWN

Populair in

Up

Service status

Toegevoegd door: cBioPortal

Uitlegger

cBioPortal Webinar 1: Introduction

cBioPortal Webinar 1: Introduction

Toegevoegd door: Farhan Haq

Uitlegger

Cancer Genomics (Part 3): Easy guide to access RNA sequencing data of cancer (Example: Cbioportal)

Cancer Genomics (Part 3): Easy guide to access RNA sequencing data of cancer (Example: Cbioportal)

Toegevoegd door: cBioPortal

Uitlegger

cBioPortal: Comparing samples based on expression level of a gene

cBioPortal: Comparing samples based on expression level of a gene

Toegevoegd door: cBioPortal

Uitlegger

cBioPortal Webinar 4: Group Comparison

cBioPortal Webinar 4: Group Comparison

Toegevoegd door: Jesse Chan

Uitlegger

Biostatistics practice: cBioportal data retrieval and Kaplan-Meir survival analysis

Biostatistics practice: cBioportal data retrieval and Kaplan-Meir survival analysis

Toegevoegd door: cBioPortal

Uitlegger

cBioPortal Webinar 5: API & R Client

cBioPortal Webinar 5: API & R Client

Toegevoegd door: CORBEL

Uitlegger

Data-integration platform for cancer research: cBioportal demo

Data-integration platform for cancer research: cBioportal demo

Toegevoegd door: cBioPortal

Uitlegger

cBioPortal Webinar 3: Expression Data Analysis

cBioPortal Webinar 3: Expression Data Analysis

Toegevoegd door: cBioPortal

Uitlegger

cBioPortal: Filtering and adding clinical data to Mutations tab

cBioPortal: Filtering and adding clinical data to Mutations tab

Toegevoegd door: cBioPortal

Uitlegger

cBioPortal: How to download data

cBioPortal: How to download data
Soortgelijke vraagt
Onlangs bezocht