Gevraagd door: Joh O'dell
VRAAGSTELLER Algemeen

Cbioportal Bioconductor

Link van Cbioportal Bioconductor pagina wordt hieronder gegeven. Pagina's met betrekking tot Cbioportal Bioconductor worden ook vermeld.

Laatst bijgewerkt: 2022-02-05 12:24:24

20

Toegevoegd door: Elke Pierce

Uitlegger

Bioconductor - cBioPortalData

Bioconductor version: Release (3.14) The cBioPortalData package takes compressed resources from repositories such as cBioPortal and assembles a MultiAssayExperiment object with Bioconductor classes. Maintainer: Marcel Ramos marcel.ramos at roswellpark.org. Citation (from within R, enter citation ("cBioPortalData") ):
Url: https://bioconductor.org/packages/release/bioc/html/cBioPortalData.html
Bioconductor - cBioPortalData

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

UNKNOWN

Populair in

Up

Service status

Toegevoegd door: Joshua Pryor

Uitlegger

cBioPortalData: User Start Guide - Bioconductor

26-10-2021 · The cBioPortalData package provides an R interface for accessing the cBioPortal study data within the Bioconductor ecosystem. It downloads study data from the cBioPortal API (the full API specification can be found here https://cbioportal.org/api) and uses Bioconductor infrastructure to cache and represent the data.
Url: https://www.bioconductor.org/packages/release/bioc//vignettes/cBioPortalData/inst/doc/cBioPortalData.html
cBioPortalData: User Start Guide - Bioconductor

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

UNKNOWN

Populair in

Up

Service status

Toegevoegd door: Web Technology Team

Uitlegger

Bioconductor - cBioPortalData (development version)

DOI: 10.18129/B9.bioc.cBioPortalData This is the development version of cBioPortalData; for the stable release version, see cBioPortalData.. Exposes and makes available data from the cBioPortal web resources. Bioconductor version: Development (3.15) The cBioPortalData package takes compressed resources from repositories such as cBioPortal and assembles a …
Url: https://www.bioconductor.org/packages/devel/bioc/html/cBioPortalData.html
Bioconductor - cBioPortalData (development version)

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

UNKNOWN

Populair in

Up

Service status

Toegevoegd door: Alan Hendry

Uitlegger

Bioconductor - cBioPortalData (development version)

DOI: 10.18129/B9.bioc.cBioPortalData This is the development version of cBioPortalData; for the stable release version, see cBioPortalData.. Exposes and makes available data from the cBioPortal web resources. Bioconductor version: Development (3.15) The cBioPortalData package takes compressed resources from repositories such as cBioPortal and assembles a …
Url: https://bioconductor.org/packages/devel/cBioPortalData/
Bioconductor - cBioPortalData (development version)

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

UNKNOWN

Populair in

Up

Service status

Toegevoegd door: Leisa Blottin

Uitlegger

cBioPortalData: Exposes and makes available data from the ...

Title Exposes and makes available data from the cBioPortal web resources Version 2.6.0 Description The cBioPortalData package takes compressed resources from repositories such as cBioPortal and assembles a MultiAssayExperiment object with Bioconductor classes. Depends R (= 4.0.0), AnVIL, MultiAssayExperiment
Url: https://bioconductor.org/packages/release/bioc/manuals/cBioPortalData/man/cBioPortalData.pdf
cBioPortalData: Exposes and makes available data from the ...

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

UNKNOWN

Populair in

Up

Service status

Toegevoegd door: Michael Schlosser

Uitlegger

cBioPortalData: User Start Guide - Waldron Lab

The cBioPortalData package provides an R interface for accessing the cBioPortal study data within the Bioconductor ecosystem. It downloads study data from the cBioPortal API (the full API specification can be found here https://cbioportal.org/api) and uses Bioconductor infrastructure to cache and represent the data.
Url: https://waldronlab.io/cBioPortalData/articles/cBioPortalData.html
cBioPortalData: User Start Guide - Waldron Lab

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

IO

Populair in

Up

Service status

Toegevoegd door: Rob Pierce

Uitlegger

cBioPortal for Cancer Genomics

Colorectal Adenocarcinoma Triplets (MSKCC, Genome Biol 2014) 138 samples. Colorectal Cancer (MSK, Gastroenterology 2020) 471 samples. Disparities in metastatic colorectal cancer between Africans and Americans (MSK, 2020) 64 samples. Metastatic Colorectal Cancer (MSKCC, Cancer Cell 2018) 1134 samples.
Url: http://www.cbioportal.org/
cBioPortal for Cancer Genomics

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

UNKNOWN

Populair in

Up

Service status

Toegevoegd door: Payam Mousavioun

Uitlegger

Bioconductor - cbpManager

Bioconductor version: Release (3.14) This R package provides an R Shiny application that enables the user to generate, manage, and edit data and metadata files suitable for the import in cBioPortal for Cancer Genomics. Create cancer studies and edit its metadata.
Url: https://bioconductor.org/packages//release/bioc/html/cbpManager.html
Bioconductor - cbpManager

UNKNOWN

Maandelijkse bezoeken

0

Alexa Rank

UNKNOWN

Populair in

Up

Service status

Toegevoegd door: Meagan Anderson

Uitlegger

cbpManager: a web application to streamline the ...

In summary, our package cbpManager is currently a unique software solution in the workflow with cBioPortal for Cancer Genomics, to assist the user in the interactive generation and management of study files suited for the later upload in cBioPortal.
Url: https://pubmed.ncbi.nlm.nih.gov/34930224/
cbpManager: a web application to streamline the ...

758,772,565

Maandelijkse bezoeken

133

Alexa Rank

US

Populair in

Up

Service status

Toegevoegd door: cBioPortal

Uitlegger

cBioPortal Webinar 1: Introduction

cBioPortal Webinar 1: Introduction

Toegevoegd door: cBioPortal

Uitlegger

The cBioPortal and OncoKB: Making complex cancer genomics data accessible and interpretable

The cBioPortal and OncoKB: Making complex cancer genomics data accessible and interpretable

Toegevoegd door: Bioconductor

Uitlegger

Multi omic Integration of cBioPortal and TCGA data with MultiAssayExperiment

Multi omic Integration of cBioPortal and TCGA data with MultiAssayExperiment

Toegevoegd door: Farhan Haq

Uitlegger

Cancer Genomics (Part 3): Easy guide to access RNA sequencing data of cancer (Example: Cbioportal)

Cancer Genomics (Part 3): Easy guide to access RNA sequencing data of cancer (Example: Cbioportal)

Toegevoegd door: cBioPortal

Uitlegger

cBioPortal: Comparing samples based on expression level of a gene

cBioPortal: Comparing samples based on expression level of a gene

Toegevoegd door: Hatem Jasim

Uitlegger

cBioPortal for cancer Genomics

cBioPortal for cancer Genomics

Toegevoegd door: cBioPortal

Uitlegger

cBioPortal Webinar 5: API & R Client

cBioPortal Webinar 5: API & R Client

Toegevoegd door: CORBEL

Uitlegger

Data-integration platform for cancer research: cBioportal demo

Data-integration platform for cancer research: cBioportal demo

Toegevoegd door: Brown University

Uitlegger

Bioconductor Workshop 1: R/Bioconductor Workshop for Genomic Data Analysis

Bioconductor Workshop 1: R/Bioconductor Workshop for Genomic Data Analysis

Toegevoegd door: Rochell Carolan

Uitlegger

oligo - Bioconductor for Genomic Data Science

oligo - Bioconductor for Genomic Data Science
Onlangs bezocht