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Broad Single Cell Portal

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Single Cell Portal

Cell. 2015 May 21;161 (5):1202-14. doi: 10.1016/j.cell.2015.05.002. Contact: [email protected] Cells, the basic units of biological structure and function, vary broadly in type and state. Singlecell genomics can characterize cell identity and function, but limitations of ease and scale have prevented its broad application.
Url: https://singlecell.broadinstitute.org/single_cell
Single Cell Portal

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Toegevoegd door: Graeme Napier

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Single Cell Portal - Broad Institute

On this site, we provide an interactive view of the single-cell RNA-seq. To access the full data, please go to ImmPort with the study accession code of SDY998 and SDY999. The source code repository of the computational pipeline for data analysis and integration is located at amp_phase1_ra. Dataset 2: Lupus Nephritis (Broad Institute)
Url: https://portals.broadinstitute.org/single_cell/study/amp-phase-1
Single Cell Portal - Broad Institute

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Toegevoegd door: Camilla Rountree

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Single Cell Portal - Broad Institute

We used Drop-seq to sequence the transcriptomes of 24,985 single Hydra cells to uncover the molecular signatures of a broad spectrum of cell states, from stem cells to terminally differentiated cells. This portal presents these data in an interactive format, and allows for visualization of sequencing statistics, clustering results, and gene ...
Url: https://portals.broadinstitute.org/single_cell/study/SCP260/stem-cell-differentiation-trajectories-in-hydra-resolved-at-single-cell-resolution
Single Cell Portal - Broad Institute

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Toegevoegd door: Samuel Curran

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Single Cell Portal - Broad Institute

Using single cell RNA-sequencing and mixed cell micromass organoids, we found that Notch3 signaling drives both a transcriptional and spatial gradients in fibroblasts emanating from vascular endothelial cells outward. In active RA, Notch3 and Notch target genes are markedly upregulated in synovial fibroblasts.
Url: https://portals.broadinstitute.org/single_cell/study/SCP469
Single Cell Portal - Broad Institute

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Toegevoegd door: Graham Hobbs

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GitHub - broadinstitute/single_cell_portal: Tutorials ...

Single-Cell Portal. Hello and thank you for using the Single-Cell Portal. We hope the portal will contribute to open science by enabling visualizing and sharing scientific insight and data surrounding single-cell RNA-Seq.
Url: https://github.com/broadinstitute/single_cell_portal
GitHub - broadinstitute/single_cell_portal: Tutorials ...

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Toegevoegd door: Des Mcdonald

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Single Cell Portal - HCA Data Portal

Single Cell Portal Jon Bistline, Eric Weitz, Jean Chang, Vicky Horst, Timothy Tickle View Single Cell Portal (SCP) is a cloud-based, scalable web application that is organized by studies with downloadable raw data, aiming to accelerate reproducible single-cell research through:
Url: https://data.humancellatlas.org/analyze/portals/single-cell-portal/
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Toegevoegd door: Daniel Mcquinn

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Single Cell Portal

Single Cell Portal accession SCP259 Genome-wide association studies (GWAS) have revealed risk alleles for ulcerative colitis (UC), but their cell type …
Url: https://singlecell.broadinstitute.org/single_cell/study/SCP259/intra-and-inter-cellular-rewiring-of-the-human-colon-during-ulcerative-colitis
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Toegevoegd door: Danny Ristevski

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Study: Single-cell Reconstruction of ... - Broad Institute

26-04-2018 · URD identified the trajectories of 25 cell types through early somitogenesis, gene expression along them, and their spatial origin in the blastula. This portal presents 38,731 single-cell transcriptomes generated using Drop-seq from 694 embryos across 12 closely spaced stages of early zebrafish development.
Url: https://singlecell.broadinstitute.org/single_cell/study/SCP162/single-cell-reconstruction-of-developmental-trajectories-during-zebrafish-embryogenesis
Study: Single-cell Reconstruction of ... - Broad Institute

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Toegevoegd door: Single Cell Portal

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Single Cell Portal - Introduction

Single Cell Portal - Introduction

Toegevoegd door: Broad Institute

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Broad Institute: How the Single Cell Portal team is supporting COVID-19 research

Broad Institute: How the Single Cell Portal team is supporting COVID-19 research

Toegevoegd door: Human Cell Atlas

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HCA Meeting: Demos - Single Cell Portal Broad

HCA Meeting: Demos - Single Cell Portal Broad

Toegevoegd door: Single Cell Portal

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Single Cell Portal - Demo

Single Cell Portal - Demo

Toegevoegd door: Be Inspired

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The 528 Hz Frequency

The 528 Hz Frequency

Toegevoegd door: Terra

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BICCN Omics Virtual Workshop Day 2 - Oct 07, 2021

BICCN Omics Virtual Workshop Day 2 - Oct 07, 2021

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Single-cell RNA-Seq data in GENEVESTIGATOR®

Single-cell RNA-Seq data in GENEVESTIGATOR®

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Steven Pope Amazon FBA Weekly Q&A - Ask Any Seller Central Question

Steven Pope Amazon FBA Weekly Q&A - Ask Any Seller Central Question

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Single cell analysis from a clinical perspective | Ralph Weissleder | SCP2018

Single cell analysis from a clinical perspective | Ralph Weissleder | SCP2018
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