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Nci Tcga Data Portal

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Laatst bijgewerkt: 2021-04-27 20:02:05

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Home | NCI Genomic Data Commons

2021-4-24 · The NCI's Genomic Data Commons (GDC) provides the cancer research community with a unified data repository that enables data sharing across cancer genomic studies in support of precision medicine. The GDC supports several cancer genome programs at the NCI Center for Cancer Genomics (), including The Cancer Genome Atlas and Therapeutically Applicable Research to Generate …
Url: https://gdc.cancer.gov/
Home | NCI Genomic Data Commons

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Toegevoegd door: Johnny Putrus

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GDC Data Portal | NCI Genomic Data Commons

2021-4-24 · The GDC Data Portal provides access to GDC harmonized data as well as an archive of legacy data from TCGA and other NCI programs. Through the GDC Data Portal, users can launch the Legacy Archive Portal to search and download legacy files. Visually Identify Data
Url: https://gdc.cancer.gov/access-data/gdc-data-portal
GDC Data Portal | NCI Genomic Data Commons

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Toegevoegd door: John Downie

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Synapse | Sage Bionetworks

2021-4-11 · Synapse is a platform for supporting scientific collaborations centered around shared biomedical data sets. Our goal is to make biomedical research more transparent, more reproducible, and more accessible to a broader audience of scientists. Synapse serves as the host site for a variety of scientific collaborations, individual research projects, and DREAM challenges.
Url: https://www.synapse.org/
Synapse | Sage Bionetworks

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Toegevoegd door: Edric Wang

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TCGA-LUAD - The Cancer Imaging Archive …

GDC Data Portal - Clinical and Genomic Data. The GDC Data Portal has extensive clinical and genomic data, which can be matched to the patient identifiers on the images here in TCIA. Below is a snapshot of clinical data extracted on 1/5/2016. TCGA-LUAD Clinical Data.zip; Explanations of the clinical data can be found on the Biospecimen Core Resource Clinical Data Forms linked below:
Url: https://wiki.cancerimagingarchive.net/display/Public/TCGA-LUAD
TCGA-LUAD - The Cancer Imaging Archive …

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Toegevoegd door: Nilesh Mehta

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Center for Cancer Genomics (CCG) - National …

2020-8-17 · NCI’s Genome Characterization Pipeline is an efficient workflow that takes in cancer tissue samples and outputs rich, publicly available genomic and clinical data. By partnering with foremost experts in tissue processing, bioinformatics, and data science, CCG produces and shares high quality, harmonized raw and processed data.
Url: https://www.cancer.gov/about-nci/organization/ccg
Center for Cancer Genomics (CCG) - National …

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Toegevoegd door: James Spring

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生物信息学最佳实践–基础篇

2017-10-14 · 自2016年7月15日起，TCGA(The Cancer Genomic Atlas) DATA PORTAL不再提供数据服务，所有数据将转入GDC(Genomic Data Commons) DATA PORTAL。 GDC网站下载TCGA数据，图形界面，操作简单。 GDC提供两种数据下载方式：
Url: http://www.biotrainee.com/jmzeng/book/basic/database.html
生物信息学最佳实践–基础篇

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A Bioinformatics Analysis Identifies the Telomerase ...

2021-4-22 · cinoma (LIHC) PanCancer Atlas dataset from The Cancer Genome Atlas (TCGA) was used [29]. Complete samples (n = 348) with mutation, copy number alteration (CNA), and mRNA expression data were used for cBioPortal data mining. For GEPIA data mining, tumors (n= 369) and the matched normal (n= 50) samples in LIHC dataset were considered.
Url: https://www.mdpi.com/2075-4426/11/5/332/pdf
A Bioinformatics Analysis Identifies the Telomerase ...

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Comprehensive molecular characterization of …

2014-7-23 · Gastric cancer is a leading cause of cancer deaths, but analysis of its molecular and clinical characteristics has been complicated by histological and aetiological heterogeneity. Here we describe ...
Url: https://www.nature.com/articles/nature13480
Comprehensive molecular characterization of …

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Toegevoegd door: NCI Scientific Events and Resources

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NCI OCCPR Webinar: Proteomic Assay Portal

NCI OCCPR Webinar: Proteomic Assay Portal

Toegevoegd door: Oncoscholar

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Accessing TCGA data from GDC portal

Accessing TCGA data from GDC portal

Toegevoegd door: National Cancer Institute

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The GDC Data Portal - Video Guides to the Genomic Data Commons

The GDC Data Portal - Video Guides to the Genomic Data Commons

Toegevoegd door: NCI Scientific Events and Resources

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Querying and Downloading Data with the Data Portal and Transfer Tool: Genomic Data Commons Workshop

Querying and Downloading Data with the Data Portal and Transfer Tool: Genomic Data Commons Workshop

Toegevoegd door: NCI Scientific Events and Resources

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GDC Data Analysis, Visualization, and Exploration (DAVE) Tools – August 26, 2019 GDC Monthly Webinar

GDC Data Analysis, Visualization, and Exploration (DAVE) Tools – August 26, 2019 GDC Monthly Webinar

Toegevoegd door: Bioinformatics Coach

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Download data from TCGA database - A tutorial video

Download data from TCGA database - A tutorial video

Toegevoegd door: Christina Ward

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Video tutorial - CBioPortal, TCGA Data Portal

Video tutorial - CBioPortal, TCGA Data Portal

Toegevoegd door: NCI Scientific Events and Resources

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NCI OCCPR Webinar: Proteomic Data Commons

NCI OCCPR Webinar: Proteomic Data Commons

Toegevoegd door: Michael Edwards

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Cancer Bioinformatics: Pt2 TCGA Tutorial

Cancer Bioinformatics: Pt2 TCGA Tutorial

Toegevoegd door: National Cancer Institute

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A Case Study Integrating Image Analysis, NCI Imaging Data Commons

A Case Study Integrating Image Analysis, NCI Imaging Data Commons
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