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Data Portal Tcga

Link van Data Portal Tcga pagina wordt hieronder gegeven. Pagina's met betrekking tot Data Portal Tcga worden ook vermeld.

Laatst bijgewerkt: 2021-04-29 13:35:11

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Toegevoegd door: Kaleel Cader

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GDC

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Url: https://portal.gdc.cancer.gov/
GDC

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Toegevoegd door: Martin Halberg

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The Cancer Genome Atlas Program - National …

15-08-2020 · The Cancer Genome Atlas (TCGA), a landmark cancer genomics program, molecularly characterized over 20,000 primary cancer and matched normal samples spanning 33 cancer types. This joint effort between NCI and the National Human Genome Research Institute began in 2006, bringing together researchers from diverse disciplines and multiple institutions.
Url: https://www.cancer.gov/about-nci/organization/ccg/research/structural-genomics/tcga
The Cancer Genome Atlas Program - National …

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Toegevoegd door: David Newlands

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Home | NCI Genomic Data Commons

The NCI's Genomic Data Commons (GDC) provides the cancer research community with a unified data repository that enables data sharing across cancer genomic studies in support of precision medicine. The GDC supports several cancer genome programs at the NCI Center for Cancer Genomics ( CCG ), including The Cancer Genome Atlas ( TCGA ) and Therapeutically Applicable Research to Generate …
Url: https://gdc.cancer.gov/
Home | NCI Genomic Data Commons

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Toegevoegd door: Anita Costin

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TCGA Barcode - GDC Docs

TCGA barcodes were used to tie together data that spans the TCGA network, since the IDs uniquely identify a set of results for a particular sample produced by a particular data …
Url: https://docs.gdc.cancer.gov/Encyclopedia/pages/TCGA_Barcode/
TCGA Barcode - GDC Docs

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Toegevoegd door: Christopher Tempest

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PanCanAtlas Publications | NCI Genomic Data …

TCGA-Clinical Data Resource (CDR) Outcome* - TCGA-CDR-SupplementalTableS1.xlsx. A curated resource of the clinical annotations for TCGA data and provides recommendations for use of clinical endpoints *It is strongly recommended that this file be used for clinical elements and survival outcome data first; more details please see the TCGA-CDR paper.
Url: https://gdc.cancer.gov/about-data/publications/pancanatlas
PanCanAtlas Publications | NCI Genomic Data …

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Toegevoegd door: Hamish Mclachlan

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TCGA-LIHC - The Cancer Imaging Archive (TCIA) …

GDC Data Portal - Clinical and Genomic Data. The GDC Data Portal has extensive clinical and genomic data, which can be matched to the patient identifiers on the images here in TCIA. Below is a snapshot of clinical data extracted on 1/5/2016. TCGA-LIHC Clinical Data.zip; Explanations of the clinical data can be found on the Biospecimen Core Resource Clinical Data Forms linked below:
Url: https://wiki.cancerimagingarchive.net/display/Public/TCGA-LIHC
TCGA-LIHC - The Cancer Imaging Archive (TCIA) …

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Bioinformatics Pipeline: mRNA Analysis - GDC Docs

mRNA Analysis Pipeline Introduction. The GDC mRNA quantification analysis pipeline measures gene level expression in HT-Seq raw read count, Fragments per Kilobase of transcript per Million mapped reads (FPKM), and FPKM-UQ (upper quartile normalization). These values are generated through this pipeline by first aligning reads to the GRCh38 reference genome and then by quantifying the mapped …
Url: https://docs.gdc.cancer.gov/Data/Bioinformatics_Pipelines/Expression_mRNA_Pipeline/
Bioinformatics Pipeline: mRNA Analysis - GDC Docs

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National Cancer Institute

Wij willen hier een beschrijving geven, maar de site die u nu bekijkt staat dit niet toe.
Url: https://portal.gdc.cancer.gov/repository
National Cancer Institute

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TCGA数据下载—TCGAbiolinks包参数详解 - 组学大 …

如果在GDC Data Portal，这个参数不用设置. 9 barcode. A list of barcodes to filter the files to download，可以指定要下载的样品，例如： barcode = c "TCGA-14-0736-02A-01R-2005-01" "TCGA-06-0211-02A-02R-2005-01" 10 data.format
Url: https://www.omicsclass.com/article/1060
TCGA数据下载—TCGAbiolinks包参数详解 - 组学大 …

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Accessing TCGA data from GDC portal

Accessing TCGA data from GDC portal

Toegevoegd door: National Cancer Institute

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The GDC Data Portal - Video Guides to the Genomic Data Commons

The GDC Data Portal - Video Guides to the Genomic Data Commons

Toegevoegd door: NCI Scientific Events and Resources

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Querying and Downloading Data with the Data Portal and Transfer Tool: Genomic Data Commons Workshop

Querying and Downloading Data with the Data Portal and Transfer Tool: Genomic Data Commons Workshop

Toegevoegd door: Precision Health

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Genomic Data Commons GDC Data Portal

Genomic Data Commons GDC Data Portal

Toegevoegd door: Andrew Dalby

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GDC Portal

GDC Portal

Toegevoegd door: Bioinformatics Coach

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Download data from TCGA database - A tutorial video

Download data from TCGA database - A tutorial video

Toegevoegd door: Christina Ward

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Video tutorial - CBioPortal, TCGA Data Portal

Video tutorial - CBioPortal, TCGA Data Portal

Toegevoegd door: Michael Edwards

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Cancer Bioinformatics: Pt2 TCGA Tutorial

Cancer Bioinformatics: Pt2 TCGA Tutorial

Toegevoegd door: NBIA Demo

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Downloading Data from the TCIA Data Portal Using the Data Retriever

Downloading Data from the TCIA Data Portal Using the Data Retriever

Toegevoegd door: Bioinformatics Coach

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Download Normal & Tumor gene expression data from tcga database using python. A tutorial video

Download Normal & Tumor gene expression data from tcga database using python. A tutorial video
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