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Cbioportal R

Link van Cbioportal R pagina wordt hieronder gegeven. Pagina's met betrekking tot Cbioportal R worden ook vermeld.

Laatst bijgewerkt: 2022-02-05 12:52:03

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Toegevoegd door: Wendy Read

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cBioPortal for Cancer Genomics

Colorectal Adenocarcinoma Triplets (MSKCC, Genome Biol 2014) 138 samples. Colorectal Cancer (MSK, Gastroenterology 2020) 471 samples. Disparities in metastatic colorectal cancer between Africans and Americans (MSK, 2020) 64 samples. Metastatic Colorectal Cancer (MSKCC, Cancer Cell 2018) 1134 samples.
Url: https://www.cbioportal.org/
cBioPortal for Cancer Genomics

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Toegevoegd door: Joshua Pryor

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cBioPortalData: User Start Guide - Bioconductor

26-10-2021 · The cBioPortalData package provides an R interface for accessing the cBioPortal study data within the Bioconductor ecosystem. It downloads study data from the cBioPortal API (the full API specification can be found here https://cbioportal.org/api) and uses Bioconductor infrastructure to cache and represent the data.
Url: https://www.bioconductor.org/packages/release/bioc//vignettes/cBioPortalData/inst/doc/cBioPortalData.html
cBioPortalData: User Start Guide - Bioconductor

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Toegevoegd door: Amy Summers

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cBioPortalData source: R/cBioPortal.R

R/cBioPortal.R defines the following functions: getDataByGenePanel getSampleInfo getGenePanelMolecular genePanelMolecular getGenePanel genePanels allSamples sampleLists samplesInSampleLists geneTable searchOps molecularData mutationData .sampleMolIds molecularProfiles clinicalData getStudies cBioPortal
Url: https://rdrr.io/bioc/cBioPortalData/src/R/cBioPortal.R
cBioPortalData source: R/cBioPortal.R

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Toegevoegd door: Agnieszka Kowal

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The R interface to the cBioPortal API Data Service ...

The R interface to the cBioPortal API Data Service — cBioPortal • cBioPortalData The R interface to the cBioPortal API Data Service This section of the documentation lists the functions that allow users to access the cBioPortal API. The main representation of the API can be obtained from the `cBioPortal` function.
Url: https://waldronlab.io/cBioPortalData/reference/cBioPortal.html
The R interface to the cBioPortal API Data Service ...

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Toegevoegd door: Harry Kefford

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cBioPortal Hands-on Introduction

cBioPortal Hands-on Introduction Version 02/December/2019. What is cBioPortal for Cancer Genomics? The tool cBioPortal is an open-source software, which is hosted by HealthRI as a data integration platform - where processed data from different research studies have been made available for view and query.
Url: https://www.health-ri.nl/sites/healthri/files/2020-03/cBioPortal%20Manual%2002Dec2019.pdf
cBioPortal Hands-on Introduction

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Toegevoegd door: Brad Baker Photography

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CBioPortal and cgdsr: An Introduction | R-bloggers

11-01-2016 · The cBio Cancer Genomics Portal is an open-access resource for interactive exploration of multidimensional cancer genomics data sets, currently providing access to data from more than 100 cancer studies.
Url: https://www.r-bloggers.com/2016/01/cbioportal-and-cgdsr-an-introduction/
CBioPortal and cgdsr: An Introduction | R-bloggers

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Toegevoegd door: Elke Pierce

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Bioconductor - cBioPortalData

Bioconductor version: Release (3.14) The cBioPortalData package takes compressed resources from repositories such as cBioPortal and assembles a MultiAssayExperiment object with Bioconductor classes. Maintainer: Marcel Ramos marcel.ramos at roswellpark.org. Citation (from within R, enter citation ("cBioPortalData") ):
Url: https://bioconductor.org/packages/release/bioc/html/cBioPortalData.html
Bioconductor - cBioPortalData

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Toegevoegd door: Michael Schlosser

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cBioPortalData: User Start Guide • cBioPortalData

The cBioPortalData package provides an R interface for accessing the cBioPortal study data within the Bioconductor ecosystem. It downloads study data from the cBioPortal API (the full API specification can be found here https://cbioportal.org/api) and uses Bioconductor infrastructure to cache and represent the data.
Url: https://waldronlab.io/cBioPortalData/articles/cBioPortalData.html
cBioPortalData: User Start Guide • cBioPortalData

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Toegevoegd door: Sam Pridham

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GitHub - cBioPortal/cgdsr: R-Based API for accessing the ...

15-12-2020 · R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS) - GitHub - cBioPortal/cgdsr: R-Based API for accessing …
Url: https://github.com/cBioPortal/cgdsr
GitHub - cBioPortal/cgdsr: R-Based API for accessing the ...

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Introduction to cBioPortal for Cancer Genomics

Introduction to cBioPortal for Cancer Genomics

Toegevoegd door: cBioPortal

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cBioPortal Webinar 1: Introduction

cBioPortal Webinar 1: Introduction

Toegevoegd door: cBioPortal

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cBioPortal Webinar 2: Mutation Details & Patient View

cBioPortal Webinar 2: Mutation Details & Patient View

Toegevoegd door: Cholangiocarcinoma Foundation

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ICRN: Introduction to cBioPortal for Cancer Genomics

ICRN: Introduction to cBioPortal for Cancer Genomics

Toegevoegd door: Farhan Haq

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Cancer Genomics (Part 3): Easy guide to access RNA sequencing data of cancer (Example: Cbioportal)

Cancer Genomics (Part 3): Easy guide to access RNA sequencing data of cancer (Example: Cbioportal)

Toegevoegd door: Cristi Vlad

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Cbioportal - Tool for Cancer Genomics Analysis [Overview]

Cbioportal - Tool for Cancer Genomics Analysis [Overview]

Toegevoegd door: cBioPortal

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cBioPortal Webinar 4: Group Comparison

cBioPortal Webinar 4: Group Comparison

Toegevoegd door: cBioPortal

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cBioPortal Webinar 5: API & R Client

cBioPortal Webinar 5: API & R Client

Toegevoegd door: CORBEL

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Data-integration platform for cancer research: cBioportal demo

Data-integration platform for cancer research: cBioportal demo
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